ISSN : 0970 - 020X, ONLINE ISSN : 2231-5039
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Abstract

Ferrocenyl Hydroxy Methyl Coupled Caffeine Synthesis, Density Functional Theory, ADME Prediction and Docking Analysis of its Binding Interactions to Coronavirus Main Protease

Sondos Abdullah J Almahmoud1, Michele Cariello2 and Amin Osman Elzupir1*

DOI : http://dx.doi.org/10.13005/ojc/390201


Abstract:

The COVID-19 pandemic has made the World aware of how crucial the development of cost-effective and scalable antiviral drugs is. Here we report the synthesis of caffeine-based 8-[(ferrocenyl)(hydroxy)methyl]-1,3,7-trimethyl-3,7-dihydro-1H-purine-2,6-dione (FHC), and its use as an inhibitor of protease (Mpro), an essential enzyme for SARS-CoV-2 viral replication. FHC was modelled through density functional theory to get an insight of its properties, and fully characterized through conventional techniques. Its activity against Mpro was investigated using a molecular docking approach, showing excellent binding affinity to the catalytic dyad of His41 and Cys145 and the active sites of Mpro with energies score ranging from −6.7 to −7.0 kcal/mol. The affinity of conformers to bind to the active pocket was 44%. Based on a detailed investigation, it appears that FHC has a safe ADME profile, and that it could be a potential inhibitor for Mpro of SARS-CoV-2.

Keywords:

ADME; Caffeine; coronavirus; DFT; Ferrocene; Molecular docking

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